Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924619.1_cds_XP_016472947.1_65126
CDS Infomation

[gene=LOC107794900] [db_xref=GeneID:107794900] [protein=uncharacterized protein LOC107794900] [protein_id=XP_016472947.1] [location=join(13338..13613,14386..14487,14804..14884,15047..15156,15296..15431,15891..15989,16748..16853,16945..17375,17493..17672,17760..17957,21078..21398,21634..21726)] [gbkey=CDS]
Sequence

ATGGATTCTGTACCGGTGAATTGGGAGGCACTCGACTCTCTAATTATCGATTTCGTCAAA
TCCGAAAACCTAATCGAAGACTCCCTTTCTCCCCCTACTTCTCCTTCGTCATCGTCATCG
TCATCTTCGTCTTCGTCTTACAAGTCACGATTACTTATTCGGCAGATCAGACGGTCAGTG
GAGGGTGGTGACATTGATACCGCTATCGATCTCTTGCGTGTTCACGCGCCTTCTCTTCTC
GATAATCATCGTCTTCTCTTCTGCTTACAGAAGCAGAGGTTTATTGAACTTTTGAGGAAA
CGAACTGCAGAGGACCGAGAATCTGCCATTAATTGCCTCCGAGAGTCACTGGCACCTTGT
GCGTTGGATGCATATCCAGAAGCATATGAGGAATTTAAGCATATTCTTCTTGCCTTGGTT
TATGATGAAGATGATAAGAATTCTCCAGTGGCGAATGAGTGGTCCCCAAAGAGGAGGATT
GACATTGCTGGACTGCTTTCATCTGTTTTAAGGGCTCATTTATGTGCATATGATCCTCTT
TTTGCAATGTCGTTGAGGTACTTGATAAGCATACACAAGTTATTTTGCTTTCGCCAGGGA
GTCCCATCACCTATATCTGATCTTACGCAGAGATTACTTCTTGAGGATCGTGACCCTCCT
GCAACACCACTTGAGAGTTTCTATGAAGCACCTCCATTTGATGAGGTGGACATACAAGCT
CTTGCTCATGCAGTAGAGATTACAAGGCAAGGGGCTATTGATAGCTTGAGATTTGCCAAG
GGTGACTTATATCAAGCATTTCAGAATGAGTTATGCCGGATAAGGTTGGATGACCCTATG
TTTGATGAGCTTGTTCATGAGTATTGTGTCTATAGGGGTTTCATCGAGTTCAGTGTGGTA
GATTCTCCTGGGATGCAACTTGATTCTGGAAGTATCAGCAATGATCAATCAGAGTGTGAA
CATTTGTCAAATAACTGTTCAACAGAAGTTGGGTATGGAACCACTAAACTTTCTGGCTGT
GGTACCTCTGCTACTCAAGTTATCATGGAGGGATCACCTGAAAGTAATACCAACTTGGTT
GGAATTCAAAGTACTGATACTGAAGAGCGTTATCCTAGCGAGACAAGCCATGGGGATTGC
AGTACCAGTTGGAATCCTCAGTTCGAAAAAGTTCTGCAGAAAAATAAATGTCTTAGAGTT
GGCGAGACAAACAAACGGAAAAGATGGAGGGGGAGACATGAAAAAGAAGAATTTTTGTCT
GGACCTACCAATGAAAGGAGCAGAGAAGAACTTAACGCCAGCAGCTCAGTTGCCAGCACG
ATTGTGTTGAAAGATCAGCAGGTTTCTCGAAAATCATGCTTCCCGAATATGATGAAGAAT
AAAGAGGAAAAGTATGAACTTGTGCTGGGCTTGCAGGAATTAGCCAGCAGAGGAATGGCA
GTAGAGGTAGTTGAGGAGATTGATGAGATAGAACCGAACTTTTTCGTGCAGAATCCTGCC
CTACTTTTTCAGCTTAAGCAGGTTGAATTTTTGAAGTTGGTTGGCTCCGGGAATCATACT
CAGGCACTGAGGGTAGCCTGTTCTTTTCTGGGTCCTTTGGCTTCTAGTCATCCTGATCTG
TTGAAGCCTTTGAAGGAGACTTTGCTAGCTTTGCTCAAACCTAATGAAGAGGGATTCAAT
GAACGCTTGCCCTTATGTGCTCTTGCCAATTCACTCCAGGTTGCTATTGGTAGGAGGTTC
GGTATTGAAGAACCCCAGCTTATGAAGATTATAAGGGCCACACTGTATACACACAGTGAG
TGGTTCAAACTTCAAATGTGTAAAGATCGGTTTGAAGGACTCTTAAGGATCGACGCCCTG
AAAGAATTTGGTGGCAACTTGATTATAGATGCTGCTTCCAGATTGGATGTTGACATGAGC
GGCGATGGATCATCTCAAGTTACTGGTTCCTCAAATAATAGGAAACAAGAAGATGGAAGT
CCAACCCAGTCATCAGCCAGAGATGTTGGATGTGATGAAAGTGCAATACTAAAAGTTATG
GAATTTCTGGCACTGCCCAGAGCAGATGCAATTCATCTCCTTGCACAATACAACGGTAAT
GCGGAGACGGTCATTCAGCAGATATTCGCGTAG

Peptide Sequence

PEP ID

XP_016472947.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107794900 [Nicotiana tabacum]
Sequence

MDSVPVNWEALDSLIIDFVKSENLIEDSLSPPTSPSSSSSSSSSSSYKSRLLIRQIRRSV
EGGDIDTAIDLLRVHAPSLLDNHRLLFCLQKQRFIELLRKRTAEDRESAINCLRESLAPC
ALDAYPEAYEEFKHILLALVYDEDDKNSPVANEWSPKRRIDIAGLLSSVLRAHLCAYDPL
FAMSLRYLISIHKLFCFRQGVPSPISDLTQRLLLEDRDPPATPLESFYEAPPFDEVDIQA
LAHAVEITRQGAIDSLRFAKGDLYQAFQNELCRIRLDDPMFDELVHEYCVYRGFIEFSVV
DSPGMQLDSGSISNDQSECEHLSNNCSTEVGYGTTKLSGCGTSATQVIMEGSPESNTNLV
GIQSTDTEERYPSETSHGDCSTSWNPQFEKVLQKNKCLRVGETNKRKRWRGRHEKEEFLS
GPTNERSREELNASSSVASTIVLKDQQVSRKSCFPNMMKNKEEKYELVLGLQELASRGMA
VEVVEEIDEIEPNFFVQNPALLFQLKQVEFLKLVGSGNHTQALRVACSFLGPLASSHPDL
LKPLKETLLALLKPNEEGFNERLPLCALANSLQVAIGRRFGIEEPQLMKIIRATLYTHSE
WFKLQMCKDRFEGLLRIDALKEFGGNLIIDAASRLDVDMSGDGSSQVTGSSNNRKQEDGS
PTQSSARDVGCDESAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA

Transcript Sequence

Gene sequence data has not been registered.